goto frappe app directory cd app/frappe
run git stash to stash changes. Again try bench update from frappe-bench
Thanks Ci2016 and Sangram
I have tried all the ways possible
git stash applied in both apps folders (erpnext and frappe)
git stash
git reset --hard
git pull --rebase
Even after this commands it was showing the same error
Have you still facing this issue? Please run git status from app/frappe
and share the result.
Hi Sangram
please find the out put below
[root@erp frappe]# git status
# On branch master
# Untracked files:
# (use "git add <file>..." to include in what will be committed)
#
# frappe/core/doctype/communication/email.py.orig
# frappe/email/queue.py.orig
# frappe/public/css/common.css.orig
# frappe/public/js/frappe/list/doclistview.js.orig
# frappe/templates/emails/print_link.html.orig
# frappe/templates/print_formats/pdf_header_footer.html.orig
# frappe/templates/print_formats/standard_macros.html.orig
# frappe/utils/pdf.py.orig
nothing added to commit but untracked files present (use "git add" to track)
All this are changes in a frappe. Now just run git stash from same directory i.e. app/frappe
and the try bench update from frappe-bench
Sangram
Ran the commands mentioned. Results below
[root@erp frappe]# pwd
/home/frappe/frappe-bench/apps/frappe
[root@erp frappe]# git stash
No local changes to save
[root@erp frappe]# cd ../..
[root@erp frappe-bench]# bench update
INFO:bench.utils:updating bench
INFO:bench.utils:git pull
Already up-to-date.
INFO:bench.utils:./env/bin/pip install Pillow
Requirement already satisfied: Pillow in ./env/lib/python2.7/site-packages
Cannot proceed with update: You have local changes in app "frappe" that are not committed.
Here are your choices:
1. Merge the frappe app manually with "git pull" / "git pull --rebase" and fix conflicts.
1. Temporarily remove your changes with "git stash" or discard them completely
with "bench update --reset" or for individual repositries "git reset --hard"
2. If your changes are helpful for others, send in a pull request via GitHub and
wait for them to be merged in the core.
you have to add these untracked files and then stash it.
Now do one thing, run git add --all then git stash and try bench update again.
Sangram,
[root@erp frappe]# git add --all
[root@erp frappe]# git stash
Saved working directory and index state WIP on master: 1c08475 Merge branch 'develop'
HEAD is now at 1c08475 Merge branch 'develop'
[root@erp frappe]# cd ../..
[root@erp frappe-bench]# bench update
INFO:bench.utils:updating bench
INFO:bench.utils:git pull
Already up-to-date.
INFO:bench.utils:./env/bin/pip install Pillow
Requirement already satisfied: Pillow in ./env/lib/python2.7/site-packages
Cannot proceed with update: You have local changes in app "erpnext" that are not committed.
Here are your choices:
1. Merge the erpnext app manually with "git pull" / "git pull --rebase" and fix conflicts.
1. Temporarily remove your changes with "git stash" or discard them completely
with "bench update --reset" or for individual repositries "git reset --hard"
2. If your changes are helpful for others, send in a pull request via GitHub and
wait for them to be merged in the core.
Do we have a manual way to do this?
Sir, do same in app/erpnext and then update.
Sangram,
Please find the output below
[root@erp frappe-bench]# cd apps/erpnext/
[root@erp erpnext]# git add --all
[root@erp erpnext]# git stash
Saved working directory and index state WIP on master: e7125c0 Merge branch 'develop'
HEAD is now at e7125c0 Merge branch 'develop'
[root@erp erpnext]# cd ../frappe/
[root@erp frappe]# git add --all
[root@erp frappe]# git stash
No local changes to save
[root@erp frappe]# cd ../..
[root@erp frappe-bench]# bench update
INFO:bench.utils:updating bench
INFO:bench.utils:git pull
Already up-to-date.
INFO:bench.utils:./env/bin/pip install Pillow
Requirement already satisfied: Pillow in ./env/lib/python2.7/site-packages
INFO:bench.app:pulling frappe
INFO:bench.utils:git pull upstream master
From https://github.com/frappe/frappe
* branch master -> FETCH_HEAD
Already up-to-date.
INFO:bench.utils:find . -name "*.pyc" -delete
INFO:bench.app:pulling erpnext
INFO:bench.utils:git pull upstream master
error: cannot open .git/FETCH_HEAD: Permission denied
Traceback (most recent call last):
File "/usr/bin/bench", line 9, in <module>
load_entry_point('bench==4.0.0', 'console_scripts', 'bench')()
File "/home/frappe/bench-repo/bench/cli.py", line 40, in cli
bench_command()
File "/usr/lib/python2.7/site-packages/click/core.py", line 716, in __call__
return self.main(*args, **kwargs)
File "/usr/lib/python2.7/site-packages/click/core.py", line 696, in main
rv = self.invoke(ctx)
File "/usr/lib/python2.7/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/usr/lib/python2.7/site-packages/click/core.py", line 889, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/usr/lib/python2.7/site-packages/click/core.py", line 534, in invoke
return callback(*args, **kwargs)
File "/home/frappe/bench-repo/bench/commands/update.py", line 62, in update
_update(pull, patch, build, bench, auto, restart_supervisor, requirements, no_backup, upgrade, force=force, reset=reset)
File "/home/frappe/bench-repo/bench/commands/update.py", line 78, in _update
pull_all_apps(bench_path=bench_path, reset=reset)
File "/home/frappe/bench-repo/bench/app.py", line 170, in pull_all_apps
remote=remote, branch=get_current_branch(app, bench_path=bench_path)), cwd=app_dir)
File "/home/frappe/bench-repo/bench/utils.py", line 130, in exec_cmd
raise CommandFailedError(cmd)
bench.utils.CommandFailedError: git pull upstream master
seems like a permission issue.
login thorugh frappe user - sudo su frappe
then bench update from frappe-bench
or refer this link - link
.
Sangram,
[root@erp ~]# su - frappe
Last login: Wed Apr 26 10:24:36 AST 2017 on pts/0
[frappe@erp ~]$ cd frappe-bench/
[frappe@erp frappe-bench]$ bench update
INFO:bench.utils:updating bench
INFO:bench.utils:git pull
Already up-to-date.
INFO:bench.utils:./env/bin/pip install Pillow
Requirement already satisfied: Pillow in ./env/lib/python2.7/site-packages
INFO:bench.app:pulling frappe
INFO:bench.utils:git pull upstream master
From https://github.com/frappe/frappe
* branch master -> FETCH_HEAD
Already up-to-date.
INFO:bench.utils:find . -name "*.pyc" -delete
INFO:bench.app:pulling erpnext
INFO:bench.utils:git pull upstream master
error: cannot open .git/FETCH_HEAD: Permission denied
Traceback (most recent call last):
File "/bin/bench", line 9, in <module>
load_entry_point('bench==4.0.0', 'console_scripts', 'bench')()
File "/home/frappe/bench-repo/bench/cli.py", line 40, in cli
bench_command()
File "/usr/lib/python2.7/site-packages/click/core.py", line 716, in __call__
return self.main(*args, **kwargs)
File "/usr/lib/python2.7/site-packages/click/core.py", line 696, in main
rv = self.invoke(ctx)
File "/usr/lib/python2.7/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/usr/lib/python2.7/site-packages/click/core.py", line 889, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/usr/lib/python2.7/site-packages/click/core.py", line 534, in invoke
return callback(*args, **kwargs)
File "/home/frappe/bench-repo/bench/commands/update.py", line 62, in update
_update(pull, patch, build, bench, auto, restart_supervisor, requirements, no_backup, upgrade, force=force, reset=reset)
File "/home/frappe/bench-repo/bench/commands/update.py", line 78, in _update
pull_all_apps(bench_path=bench_path, reset=reset)
File "/home/frappe/bench-repo/bench/app.py", line 170, in pull_all_apps
remote=remote, branch=get_current_branch(app, bench_path=bench_path)), cwd=app_dir)
File "/home/frappe/bench-repo/bench/utils.py", line 130, in exec_cmd
raise CommandFailedError(cmd)
bench.utils.CommandFailedError: git pull upstream master
[frappe@erp erpnext]$ git reset --hard
HEAD is now at e7125c0 Merge branch 'develop'
[frappe@erp erpnext]$ git pull
remote: Counting objects: 12, done.
remote: Compressing objects: 100% (12/12), done.
remote: Total 12 (delta 3), reused 0 (delta 0), pack-reused 0
Unpacking objects: 100% (12/12), done.
From https://github.com/frappe/erpnext
e7125c0..f7d81c7 master -> upstream/master
c27d9f7..f7d81c7 develop -> upstream/develop
* [new tag] v8.0.18 -> v8.0.18
Updating e7125c0..f7d81c7
Fast-forward
erpnext/__init__.py | 2 +-
erpnext/accounts/doctype/bank_guarantee/__init__.py | 0
erpnext/accounts/doctype/bank_guarantee/bank_guarantee.js | 30 +++++++
erpnext/accounts/doctype/bank_guarantee/bank_guarantee.json | 448 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
erpnext/accounts/doctype/bank_guarantee/bank_guarantee.py | 10 +++
erpnext/accounts/doctype/bank_guarantee/test_bank_guarantee.py | 12 +++
erpnext/accounts/report/balance_sheet/balance_sheet.js | 6 ++
erpnext/accounts/report/balance_sheet/balance_sheet.py | 33 +++++--
erpnext/accounts/report/cash_flow/cash_flow.py | 2 +-
erpnext/accounts/report/financial_statements.py | 17 ++--
erpnext/accounts/report/profit_and_loss_statement/profit_and_loss_statement.py | 9 +-
erpnext/config/accounts.py | 5 ++
erpnext/config/crm.py | 12 +++
erpnext/crm/report/campaign_efficiency/__init__.py | 0
erpnext/crm/report/campaign_efficiency/campaign_efficiency.js | 19 ++++
erpnext/crm/report/campaign_efficiency/campaign_efficiency.json | 30 +++++++
erpnext/crm/report/campaign_efficiency/campaign_efficiency.py | 89 +++++++++++++++++++
erpnext/crm/report/lead_owner_efficiency/__init__.py | 0
erpnext/crm/report/lead_owner_efficiency/lead_owner_efficiency.js | 17 ++++
erpnext/crm/report/lead_owner_efficiency/lead_owner_efficiency.json | 30 +++++++
erpnext/crm/report/lead_owner_efficiency/lead_owner_efficiency.py | 26 ++++++
erpnext/docs/assets/img/accounts/bank-guarantee.png | Bin 0 -> 214869 bytes
erpnext/docs/assets/img/accounts/exempted-item.png | Bin 0 -> 43627 bytes
erpnext/docs/assets/img/accounts/item-wise-tax.png | Bin 0 -> 46089 bytes
erpnext/docs/assets/img/accounts/tax-calulation.png | Bin 0 -> 92190 bytes
erpnext/docs/assets/img/accounts/tax-master.png | Bin 0 -> 72034 bytes
erpnext/docs/assets/old_images/erpnext/item-wise-tax-calc.png | Bin 28950 -> 0 bytes
erpnext/docs/assets/old_images/erpnext/item-wise-tax-master.png | Bin 10609 -> 0 bytes
erpnext/docs/assets/old_images/erpnext/item-wise-tax.png | Bin 11337 -> 0 bytes
erpnext/docs/user/manual/en/accounts/bank-guarantee.md | 9 ++
erpnext/docs/user/manual/en/accounts/index.txt | 1 +
erpnext/docs/user/manual/en/accounts/item-wise-taxation.md | 30 ++++---
erpnext/docs/user/manual/en/setting-up/settings/module-settings.md | 2 +-
erpnext/patches/v8_0/update_status_as_paid_for_completed_expense_claim.py | 4 +-
34 files changed, 810 insertions(+), 33 deletions(-)
create mode 100644 erpnext/accounts/doctype/bank_guarantee/__init__.py
create mode 100644 erpnext/accounts/doctype/bank_guarantee/bank_guarantee.js
create mode 100644 erpnext/accounts/doctype/bank_guarantee/bank_guarantee.json
create mode 100644 erpnext/accounts/doctype/bank_guarantee/bank_guarantee.py
create mode 100644 erpnext/accounts/doctype/bank_guarantee/test_bank_guarantee.py
create mode 100644 erpnext/crm/report/campaign_efficiency/__init__.py
create mode 100644 erpnext/crm/report/campaign_efficiency/campaign_efficiency.js
create mode 100644 erpnext/crm/report/campaign_efficiency/campaign_efficiency.json
create mode 100644 erpnext/crm/report/campaign_efficiency/campaign_efficiency.py
create mode 100644 erpnext/crm/report/lead_owner_efficiency/__init__.py
create mode 100644 erpnext/crm/report/lead_owner_efficiency/lead_owner_efficiency.js
create mode 100644 erpnext/crm/report/lead_owner_efficiency/lead_owner_efficiency.json
create mode 100644 erpnext/crm/report/lead_owner_efficiency/lead_owner_efficiency.py
create mode 100644 erpnext/docs/assets/img/accounts/bank-guarantee.png
create mode 100644 erpnext/docs/assets/img/accounts/exempted-item.png
create mode 100644 erpnext/docs/assets/img/accounts/item-wise-tax.png
create mode 100644 erpnext/docs/assets/img/accounts/tax-calulation.png
create mode 100644 erpnext/docs/assets/img/accounts/tax-master.png
delete mode 100644 erpnext/docs/assets/old_images/erpnext/item-wise-tax-calc.png
delete mode 100644 erpnext/docs/assets/old_images/erpnext/item-wise-tax-master.png
delete mode 100644 erpnext/docs/assets/old_images/erpnext/item-wise-tax.png
create mode 100644 erpnext/docs/user/manual/en/accounts/bank-guarantee.md
[frappe@erp erpnext]$ cd ../frappe/
[frappe@erp frappe]$ git reset --hard
HEAD is now at 1c08475 Merge branch 'develop'
[frappe@erp frappe]$ git pull
Already up-to-date.
[frappe@erp frappe-bench]$ bench update
INFO:bench.utils:updating bench
INFO:bench.utils:git pull
Already up-to-date.
INFO:bench.utils:./env/bin/pip install Pillow
Requirement already satisfied: Pillow in ./env/lib/python2.7/site-packages
INFO:bench.app:pulling frappe
INFO:bench.utils:git pull upstream master
From https://github.com/frappe/frappe
* branch master -> FETCH_HEAD
Already up-to-date.
INFO:bench.utils:find . -name "*.pyc" -delete
INFO:bench.app:pulling erpnext
INFO:bench.utils:git pull upstream master
From https://github.com/frappe/erpnext
* branch master -> FETCH_HEAD
Already up-to-date.
INFO:bench.utils:find . -name "*.pyc" -delete
Updating Python libraries...
INFO:bench.utils:./env/bin/pip install --upgrade pip
Requirement already up-to-date: pip in ./env/lib/python2.7/site-packages
INFO:bench.utils:./env/bin/pip install -q -r /home/frappe/bench-repo/requirements.txt
INFO:bench.utils:./env/bin/pip install -q -r ./apps/erpnext/requirements.txt
INFO:bench.utils:./env/bin/pip install -q -r ./apps/frappe/requirements.txt
Backing up sites...
Patching sites...
Migrating erp.cubixys.com
Executing frappe.patches.v8_0.update_records_in_global_search in erp.cubixys.com (884f6bb404)
Traceback (most recent call last):
File "/usr/lib64/python2.7/runpy.py", line 162, in _run_module_as_main
"__main__", fname, loader, pkg_name)
File "/usr/lib64/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File "/home/frappe/frappe-bench/apps/frappe/frappe/utils/bench_helper.py", line 79, in <module>
main()
File "/home/frappe/frappe-bench/apps/frappe/frappe/utils/bench_helper.py", line 16, in main
click.Group(commands=commands)(prog_name='bench')
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 716, in __call__
return self.main(*args, **kwargs)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 696, in main
rv = self.invoke(ctx)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 889, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 534, in invoke
return callback(*args, **kwargs)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/decorators.py", line 17, in new_func
return f(get_current_context(), *args, **kwargs)
File "/home/frappe/frappe-bench/apps/frappe/frappe/commands/__init__.py", line 24, in _func
ret = f(frappe._dict(ctx.obj), *args, **kwargs)
File "/home/frappe/frappe-bench/apps/frappe/frappe/commands/site.py", line 210, in migrate
migrate(context.verbose, rebuild_website=rebuild_website)
File "/home/frappe/frappe-bench/apps/frappe/frappe/migrate.py", line 31, in migrate
frappe.modules.patch_handler.run_all()
File "/home/frappe/frappe-bench/apps/frappe/frappe/modules/patch_handler.py", line 29, in run_all
if not run_single(patchmodule = patch):
File "/home/frappe/frappe-bench/apps/frappe/frappe/modules/patch_handler.py", line 63, in run_single
return execute_patch(patchmodule, method, methodargs)
File "/home/frappe/frappe-bench/apps/frappe/frappe/modules/patch_handler.py", line 89, in execute_patch
frappe.db.rollback()
File "/home/frappe/frappe-bench/apps/frappe/frappe/database.py", line 737, in rollback
self.sql("rollback")
File "/home/frappe/frappe-bench/apps/frappe/frappe/database.py", line 149, in sql
self._cursor.execute(query)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/MySQLdb/cursors.py", line 205, in execute
self.errorhandler(self, exc, value)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/MySQLdb/connections.py", line 36, in defaulterrorhandler
raise errorclass, errorvalue
_mysql_exceptions.OperationalError: (2006, 'MySQL server has gone away')
Please note that I could not do the below steps as I dont have .bench folder
go to folder /home/frappe/.bench
and run the following command:
git reset --hard
git pull
Restart mysql
Sangram,
I have tried restarting mysql (before and now) following your first post
It still gives the same error
Please find the latest steps done
[frappe@localhost frappe-bench]$ bench update
INFO:bench.utils:updating bench
INFO:bench.utils:git pull
Already up-to-date.
remote: Counting objects: 57, done.
remote: Compressing objects: 100% (43/43), done.
error: insufficient permission for adding an object to repository database .git/objects
fatal: failed to write object
fatal: unpack-objects failed
remote: Counting objects: 57, done.
remote: Compressing objects: 100% (43/43), done.
error: insufficient permission for adding an object to repository database .git/objects
fatal: failed to write object
fatal: unpack-objects failed
INFO:bench.utils:./env/bin/pip install Pillow
Requirement already satisfied: Pillow in ./env/lib/python2.7/site-packages
INFO:bench.app:pulling frappe
INFO:bench.utils:git pull upstream master
remote: Counting objects: 21, done.
remote: Compressing objects: 100% (9/9), done.
remote: Total 21 (delta 15), reused 12 (delta 12), pack-reused 0
error: insufficient permission for adding an object to repository database .git/objects
fatal: failed to write object
fatal: unpack-objects failed
Traceback (most recent call last):
File "/bin/bench", line 9, in <module>
load_entry_point('bench==4.0.0', 'console_scripts', 'bench')()
File "/home/frappe/bench-repo/bench/cli.py", line 40, in cli
bench_command()
File "/usr/lib/python2.7/site-packages/click/core.py", line 716, in __call__
return self.main(*args, **kwargs)
File "/usr/lib/python2.7/site-packages/click/core.py", line 696, in main
rv = self.invoke(ctx)
File "/usr/lib/python2.7/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/usr/lib/python2.7/site-packages/click/core.py", line 889, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/usr/lib/python2.7/site-packages/click/core.py", line 534, in invoke
return callback(*args, **kwargs)
File "/home/frappe/bench-repo/bench/commands/update.py", line 62, in update
_update(pull, patch, build, bench, auto, restart_supervisor, requirements, no_backup, upgrade, force=force, reset=reset)
File "/home/frappe/bench-repo/bench/commands/update.py", line 78, in _update
pull_all_apps(bench_path=bench_path, reset=reset)
File "/home/frappe/bench-repo/bench/app.py", line 170, in pull_all_apps
remote=remote, branch=get_current_branch(app, bench_path=bench_path)), cwd=app_dir)
File "/home/frappe/bench-repo/bench/utils.py", line 130, in exec_cmd
raise CommandFailedError(cmd)
bench.utils.CommandFailedError: git pull upstream master
changed the permission of the .git folder to frappe:frappe
[root@localhost sites]# chown -R frappe:frappe /home/frappe/frappe-bench/apps/frappe/.git
Finally ran the bench update and see the same error again
[root@localhost sites]# su - frappe
Last login: Wed Apr 26 14:03:22 AST 2017 on pts/0
[frappe@localhost ~]$ cd /home/frappe/frappe-bench/
[frappe@localhost frappe-bench]$ bench update
INFO:bench.utils:updating bench
INFO:bench.utils:git pull
Already up-to-date.
remote: Counting objects: 57, done.
remote: Compressing objects: 100% (43/43), done.
remote: Total 57 (delta 30), reused 14 (delta 14), pack-reused 0
Unpacking objects: 100% (57/57), done.
From https://github.com/frappe/frappe
1c08475..44832f0 master -> upstream/master
1c08475..b6c36a6 develop -> upstream/develop
* [new tag] v8.0.26 -> v8.0.26
INFO:bench.utils:./env/bin/pip install Pillow
Requirement already satisfied: Pillow in ./env/lib/python2.7/site-packages
INFO:bench.app:pulling frappe
INFO:bench.utils:git pull upstream master
From https://github.com/frappe/frappe
* branch master -> FETCH_HEAD
Updating 1c08475..44832f0
Fast-forward
frappe/__init__.py | 2 +-
frappe/core/page/user_permissions/user_permissions.py | 8 ++++++--
frappe/public/js/frappe/form/footer/timeline_item.html | 2 +-
3 files changed, 8 insertions(+), 4 deletions(-)
INFO:bench.utils:find . -name "*.pyc" -delete
INFO:bench.app:pulling erpnext
INFO:bench.utils:git pull upstream master
remote: Counting objects: 23, done.
remote: Compressing objects: 100% (23/23), done.
remote: Total 23 (delta 6), reused 0 (delta 0), pack-reused 0
Unpacking objects: 100% (23/23), done.
From https://github.com/frappe/erpnext
* branch master -> FETCH_HEAD
Updating f7d81c7..f26dcbc
Fast-forward
erpnext/__init__.py | 2 +-
erpnext/buying/doctype/purchase_order/purchase_order_dashboard.py | 10 +++++++++-
erpnext/selling/doctype/sales_order/sales_order_dashboard.py | 7 +++++++
erpnext/stock/doctype/batch/batch.py | 20 +++++++++++---------
4 files changed, 28 insertions(+), 11 deletions(-)
INFO:bench.utils:find . -name "*.pyc" -delete
Updating Python libraries...
INFO:bench.utils:./env/bin/pip install --upgrade pip
Requirement already up-to-date: pip in ./env/lib/python2.7/site-packages
INFO:bench.utils:./env/bin/pip install -q -r /home/frappe/bench-repo/requirements.txt
INFO:bench.utils:./env/bin/pip install -q -r ./apps/erpnext/requirements.txt
INFO:bench.utils:./env/bin/pip install -q -r ./apps/frappe/requirements.txt
Backing up sites...
Patching sites...
Migrating erp.cubixys.com
Executing frappe.patches.v8_0.update_records_in_global_search in erp.cubixys.com (884f6bb404)
Traceback (most recent call last):
File "/usr/lib64/python2.7/runpy.py", line 162, in _run_module_as_main
"__main__", fname, loader, pkg_name)
File "/usr/lib64/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File "/home/frappe/frappe-bench/apps/frappe/frappe/utils/bench_helper.py", line 79, in <module>
main()
File "/home/frappe/frappe-bench/apps/frappe/frappe/utils/bench_helper.py", line 16, in main
click.Group(commands=commands)(prog_name='bench')
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 716, in __call__
return self.main(*args, **kwargs)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 696, in main
rv = self.invoke(ctx)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 889, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/core.py", line 534, in invoke
return callback(*args, **kwargs)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/click/decorators.py", line 17, in new_func
return f(get_current_context(), *args, **kwargs)
File "/home/frappe/frappe-bench/apps/frappe/frappe/commands/__init__.py", line 24, in _func
ret = f(frappe._dict(ctx.obj), *args, **kwargs)
File "/home/frappe/frappe-bench/apps/frappe/frappe/commands/site.py", line 210, in migrate
migrate(context.verbose, rebuild_website=rebuild_website)
File "/home/frappe/frappe-bench/apps/frappe/frappe/migrate.py", line 31, in migrate
frappe.modules.patch_handler.run_all()
File "/home/frappe/frappe-bench/apps/frappe/frappe/modules/patch_handler.py", line 29, in run_all
if not run_single(patchmodule = patch):
File "/home/frappe/frappe-bench/apps/frappe/frappe/modules/patch_handler.py", line 63, in run_single
return execute_patch(patchmodule, method, methodargs)
File "/home/frappe/frappe-bench/apps/frappe/frappe/modules/patch_handler.py", line 89, in execute_patch
frappe.db.rollback()
File "/home/frappe/frappe-bench/apps/frappe/frappe/database.py", line 737, in rollback
self.sql("rollback")
File "/home/frappe/frappe-bench/apps/frappe/frappe/database.py", line 149, in sql
self._cursor.execute(query)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/MySQLdb/cursors.py", line 205, in execute
self.errorhandler(self, exc, value)
File "/home/frappe/frappe-bench/env/lib/python2.7/site-packages/MySQLdb/connections.py", line 36, in defaulterrorhandler
raise errorclass, errorvalue
_mysql_exceptions.OperationalError: (2006, 'MySQL server has gone away')
The command ‘bench update’ was run as root user also and thrown the same error
DEAR Sagar
You are a life savior
The solution is here…
edit /etc/my.cnf.d/server.cnf
add a line under [mysqld]
max_allowed_packet=500M
now restart the MySQL service once you are done.
Now go back to /home/frappe/frappe-bench and run bench update
Sagar, let me thank you again a million times 
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