Bench migrate: Lost connection to MySQL server during query

After I successfully restored a backup dump to my local development, I enter ‘bench migrate’ then it suddenly throws an error “pymysql.err.OperationalError: (2013, ‘Lost connection to MySQL server during query’)”. For your reference, here’s the full traceback:

Traceback (most recent call last):
  File "/usr/local/opt/python@3.7/Frameworks/Python.framework/Versions/3.7/lib/python3.7/runpy.py", line 193, in _run_module_as_main
    "__main__", mod_spec)
  File "/usr/local/opt/python@3.7/Frameworks/Python.framework/Versions/3.7/lib/python3.7/runpy.py", line 85, in _run_code
    exec(code, run_globals)
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/utils/bench_helper.py", line 110, in <module>
    main()
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/utils/bench_helper.py", line 20, in main
    click.Group(commands=commands)(prog_name="bench")
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/click/core.py", line 829, in __call__
    return self.main(*args, **kwargs)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/click/core.py", line 782, in main
    rv = self.invoke(ctx)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/click/core.py", line 1259, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/click/core.py", line 1259, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/click/core.py", line 1066, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/click/core.py", line 610, in invoke
    return callback(*args, **kwargs)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/click/decorators.py", line 21, in new_func
    return f(get_current_context(), *args, **kwargs)
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/commands/__init__.py", line 31, in _func
    ret = f(frappe._dict(ctx.obj), *args, **kwargs)
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/commands/site.py", line 433, in migrate
    migrate(context.verbose, skip_failing=skip_failing, skip_search_index=skip_search_index)
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/migrate.py", line 77, in migrate
    sync_customizations()
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/modules/utils.py", line 112, in sync_customizations
    sync_customizations_for_doctype(data, folder)
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/modules/utils.py", line 165, in sync_customizations_for_doctype
    sync("property_setters", "Property Setter", "doc_type")
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/modules/utils.py", line 158, in sync
    sync_single_doctype(doc_type)
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/modules/utils.py", line 139, in sync_single_doctype
    _insert(d)
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/modules/utils.py", line 131, in _insert
    doc.db_insert()
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/model/base_document.py", line 418, in db_insert
    list(d.values()),
  File "/Users/dev/bench/frappe-bench/apps/frappe/frappe/database/database.py", line 187, in sql
    self._cursor.execute(query, values)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/pymysql/cursors.py", line 148, in execute
    result = self._query(query)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/pymysql/cursors.py", line 310, in _query
    conn.query(q)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/pymysql/connections.py", line 548, in query
    self._affected_rows = self._read_query_result(unbuffered=unbuffered)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/pymysql/connections.py", line 775, in _read_query_result
    result.read()
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/pymysql/connections.py", line 1156, in read
    first_packet = self.connection._read_packet()
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/pymysql/connections.py", line 692, in _read_packet
    packet_header = self._read_bytes(4)
  File "/Users/dev/bench/frappe-bench/env/lib/python3.7/site-packages/pymysql/connections.py", line 749, in _read_bytes
    CR.CR_SERVER_LOST, "Lost connection to MySQL server during query"
pymysql.err.OperationalError: (2013, 'Lost connection to MySQL server during query')

frappe version: 13.50.3
bench: 5.4.1
mariadb: 10.4.31
machine: Mac M1
dump size in gz: 1.37gb

Enough disk space?