New company chart of account

I have two companies in my erpnext account. I started the new company because I wanted to start from the scratch with my chart of accounts. I have done stock reconciliation in my new company and create few sales invoices but the values am getting as my total current assets its much far than the actual value of the stocks and the invoices. it looks like the system is duplicating the quantities in old company and the new company can any one help.

Hi ,
Cant comment from the extract screen provided , You will need to check Trial Balance and see where the difference is